Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase family protein subunit m | DUE52_21635 | Not Available | Positive | 5385285 - 5386304 | 36434.3 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | DUE52_21640 | Not Available | Positive | 5386307 - 5388541 | 80046.2 |
| cupin domain-containing protein | DUE52_21645 | Not Available | Positive | 5388710 - 5389105 | 14475.1 |
| sugar o-acetyltransferase | DUE52_21650 | Not Available | Positive | 5389149 - 5389751 | 21398.7 |
| hypothetical protein | DUE52_21655 | Not Available | Negative | 5389758 - 5390564 | 29712.8 |
| hypothetical protein | DUE52_21660 | Not Available | Negative | 5390614 - 5390976 | 13961.7 |
| hypothetical protein | DUE52_21665 | Not Available | Negative | 5391021 - 5391680 | 23259.5 |
| voc family protein | DUE52_21670 | Not Available | Negative | 5391708 - 5392064 | 13575.2 |
| crp/fnr family transcriptional regulator | DUE52_21675 | Not Available | Negative | 5392130 - 5392714 | 22084.8 |
| sugar phosphate isomerase/epimerase | DUE52_21680 | Not Available | Negative | 5392776 - 5393684 | 33089.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
