Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DUE52_02105 | Not Available | Negative | 532573 - 533868 | 45986.0 |
| nadh-quinone oxidoreductase subunit j | DUE52_02110 | Not Available | Negative | 533989 - 534507 | 18753.7 |
| nadh-quinone oxidoreductase subunit i | DUE52_02115 | Not Available | Negative | 534518 - 535081 | 21390.0 |
| nadh-quinone oxidoreductase subunit nuoh | DUE52_02120 | Not Available | Negative | 535098 - 536249 | 42485.6 |
| fe-s-binding domain-containing protein | DUE52_02125 | Not Available | Negative | 536330 - 537415 | 40467.4 |
| duf29 family protein | DUE52_02130 | Not Available | Negative | 537416 - 537856 | 16691.0 |
| nadh oxidoreductase (quinone) subunit f | DUE52_02135 | Not Available | Negative | 537886 - 539226 | 48262.2 |
| phytanoyl-coa dioxygenase | DUE52_02140 | Not Available | Negative | 539276 - 540307 | 39440.9 |
| nad(p)h-dependent oxidoreductase subunit e | DUE52_02145 | Not Available | Negative | 540356 - 540853 | 19069.1 |
| duf29 domain-containing protein | DUE52_02150 | Not Available | Negative | 540860 - 541300 | 17614.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
