Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent malic enzyme | DUE52_21585 | Not Available | Positive | 5374018 - 5376282 | 82511.6 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | DUE52_21590 | Not Available | Negative | 5376289 - 5377425 | 41697.5 |
| peptide chain release factor n(5)-glutamine methyltransferase | DUE52_21595 | Not Available | Positive | 5377547 - 5378392 | 31883.2 |
| moxr family atpase | DUE52_21600 | Not Available | Positive | 5378512 - 5379486 | 36788.6 |
| carboxylesterase/lipase family protein | DUE52_21605 | Not Available | Negative | 5379614 - 5381275 | 60702.1 |
| lysr family transcriptional regulator | DUE52_21610 | Not Available | Positive | 5381429 - 5382337 | 33628.1 |
| arac family transcriptional regulator | DUE52_21615 | Not Available | Positive | 5382474 - 5383352 | 33798.8 |
| cupin domain-containing protein | DUE52_21620 | Not Available | Positive | 5383563 - 5384066 | 18371.8 |
| hypothetical protein | DUE52_21625 | Not Available | Positive | 5384068 - 5384553 | 17246.7 |
| (2fe-2s)-binding protein | DUE52_21630 | Not Available | Positive | 5384638 - 5385288 | 23155.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
