Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_21380 | Not Available | Positive | 5321414 - 5323372 | 74879.5 |
| t9ss c-terminal target domain-containing protein | DUE52_21385 | Not Available | Negative | 5324066 - 5328862 | 172095.0 |
| duf1304 domain-containing protein | DUE52_21390 | Not Available | Negative | 5329336 - 5329707 | 13607.2 |
| bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrr | DUE52_21395 | Not Available | Negative | 5329753 - 5330292 | 20939.5 |
| aminoacyl-trna hydrolase | DUE52_21400 | Not Available | Positive | 5330412 - 5330975 | 20860.1 |
| hypothetical protein | DUE52_21405 | Not Available | Negative | 5331715 - 5332011 | 10979.4 |
| hypothetical protein | DUE52_21410 | Not Available | Negative | 5332055 - 5332582 | 18732.0 |
| hypothetical protein | DUE52_21415 | Not Available | Negative | 5332734 - 5334131 | 51703.0 |
| rna polymerase sigma factor | DUE52_21420 | Not Available | Negative | 5334118 - 5334669 | 21588.7 |
| tandem-95 repeat protein | DUE52_21425 | Not Available | Negative | 5334745 - 5336007 | 46303.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
