Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_21330 | Not Available | Negative | 5309550 - 5310077 | 19487.3 |
| 3',5'-cyclic-nucleotide phosphodiesterase | DUE52_21335 | Not Available | Negative | 5310093 - 5311052 | 35131.4 |
| serine/threonine protein kinase | DUE52_21340 | Not Available | Negative | 5311101 - 5311946 | 31476.9 |
| abc transporter atp-binding protein | DUE52_21345 | Not Available | Negative | 5311966 - 5313747 | 66709.2 |
| hypothetical protein | DUE52_21350 | Not Available | Negative | 5313747 - 5315072 | 49352.2 |
| hypothetical protein | DUE52_21355 | Not Available | Negative | 5315215 - 5315538 | 12171.5 |
| duf4249 domain-containing protein | DUE52_21360 | Not Available | Negative | 5315640 - 5316677 | 38005.4 |
| tonb-dependent receptor | DUE52_21365 | Not Available | Negative | 5316837 - 5319149 | 85723.4 |
| sugar transferase | DUE52_21370 | Not Available | Positive | 5319996 - 5320652 | 25006.7 |
| lyttr family transcriptional regulator | DUE52_21375 | Not Available | Positive | 5320777 - 5321133 | 13985.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
