Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| caspase family protein | DUE52_21280 | Not Available | Negative | 5296266 - 5297780 | 54184.3 |
| hypothetical protein | DUE52_21285 | Not Available | Negative | 5297791 - 5298660 | 31796.9 |
| hypothetical protein | DUE52_21290 | Not Available | Negative | 5298711 - 5299985 | 47565.7 |
| hypothetical protein | DUE52_21295 | Not Available | Negative | 5299990 - 5301747 | 66260.1 |
| duf4384 domain-containing protein | DUE52_21300 | Not Available | Negative | 5301800 - 5303320 | 56640.4 |
| tetratricopeptide repeat protein | DUE52_21305 | Not Available | Negative | 5303332 - 5304897 | 58150.9 |
| hypothetical protein | DUE52_21310 | Not Available | Negative | 5304894 - 5305922 | 39005.0 |
| hypothetical protein | DUE52_21315 | Not Available | Negative | 5305924 - 5306937 | 38732.2 |
| hypothetical protein | DUE52_21320 | Not Available | Negative | 5306974 - 5307576 | 22919.6 |
| caspase family protein | DUE52_21325 | Not Available | Negative | 5307624 - 5308970 | 49283.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
