Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf354 domain-containing protein | DUE52_21125 | Not Available | Negative | 5263974 - 5265062 | 41833.9 |
| acyltransferase | DUE52_21130 | Not Available | Negative | 5265064 - 5265606 | 19387.1 |
| n-acetyl sugar amidotransferase | DUE52_21135 | Not Available | Negative | 5265687 - 5266835 | 44392.5 |
| imidazole glycerol phosphate synthase subunit hisf | DUE52_21140 | Not Available | Negative | 5266839 - 5267600 | 27843.9 |
| imidazole glycerol phosphate synthase subunit hish | DUE52_21145 | Not Available | Negative | 5267628 - 5268254 | 23847.9 |
| glycosyltransferase | DUE52_21150 | Not Available | Negative | 5268251 - 5269189 | 34943.4 |
| hypothetical protein | DUE52_21155 | Not Available | Negative | 5269196 - 5270611 | 54045.2 |
| glycosyltransferase | DUE52_21160 | Not Available | Negative | 5270604 - 5271725 | 42891.1 |
| glycosyltransferase family 2 protein | DUE52_21165 | Not Available | Negative | 5271722 - 5272675 | 37484.1 |
| hypothetical protein | DUE52_21170 | Not Available | Negative | 5272690 - 5273037 | 13317.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
