Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_02055 | Not Available | Positive | 520752 - 521669 | 35049.5 |
| hypothetical protein | DUE52_02060 | Not Available | Positive | 521840 - 522826 | 38651.9 |
| glycosyltransferase family 1 protein | DUE52_02065 | Not Available | Positive | 522839 - 523942 | 42099.6 |
| hypothetical protein | DUE52_02070 | Not Available | Positive | 524102 - 525004 | 33854.2 |
| glycosyltransferase | DUE52_02075 | Not Available | Positive | 525057 - 525797 | 28368.8 |
| o-antigen ligase domain-containing protein | DUE52_02080 | Not Available | Positive | 525794 - 527089 | 48645.1 |
| glycosyltransferase family 1 protein | DUE52_02085 | Not Available | Positive | 527118 - 528197 | 40372.8 |
| glycosyltransferase family 4 protein | DUE52_02090 | Not Available | Positive | 528267 - 529400 | 43178.8 |
| sugar transferase | DUE52_02095 | Not Available | Positive | 529660 - 531042 | 53253.9 |
| hypothetical protein | DUE52_02100 | Not Available | Positive | 531069 - 532556 | 55229.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
