Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_21075 | Not Available | Positive | 5250549 - 5253356 | 106894.0 |
| hypothetical protein | DUE52_21080 | Not Available | Positive | 5253377 - 5255608 | 81360.2 |
| hypothetical protein | DUE52_21085 | Not Available | Positive | 5255614 - 5257011 | 51892.5 |
| hypothetical protein | DUE52_21090 | Not Available | Positive | 5257118 - 5258734 | 61365.8 |
| hypothetical protein | DUE52_21095 | Not Available | Negative | 5258832 - 5259482 | 23231.4 |
| hypothetical protein | DUE52_21100 | Not Available | Negative | 5259494 - 5260954 | 54520.0 |
| upxy family transcription antiterminator | DUE52_21105 | Not Available | Negative | 5261012 - 5261509 | 19140.4 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | DUE52_21110 | Not Available | Negative | 5261602 - 5262747 | 42645.5 |
| vanz family protein | DUE52_21115 | Not Available | Negative | 5262775 - 5263182 | 15442.2 |
| hypothetical protein | DUE52_21120 | Not Available | Negative | 5263219 - 5263974 | 29731.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
