Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4249 domain-containing protein | DUE52_20975 | Not Available | Positive | 5219504 - 5220286 | 28714.9 |
| dihydrodipicolinate synthase family protein | DUE52_20980 | Not Available | Negative | 5220332 - 5221405 | 39481.0 |
| nad(p)-dependent oxidoreductase | DUE52_20985 | Not Available | Negative | 5221417 - 5222433 | 37029.4 |
| divalent metal cation transporter | DUE52_20990 | Not Available | Negative | 5222439 - 5223674 | 43391.5 |
| duf2075 domain-containing protein | DUE52_20995 | Not Available | Positive | 5223825 - 5225723 | 70839.8 |
| hypothetical protein | DUE52_21000 | Not Available | Negative | 5225795 - 5230666 | 171357.0 |
| hypothetical protein | DUE52_21005 | Not Available | Negative | 5231109 - 5232290 | 44101.5 |
| hypothetical protein | DUE52_21010 | Not Available | Negative | 5232295 - 5233239 | 35866.4 |
| hypothetical protein | DUE52_21015 | Not Available | Negative | 5233239 - 5233700 | 17251.3 |
| hypothetical protein | DUE52_21020 | Not Available | Positive | 5233954 - 5235927 | 75162.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
