Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4976 domain-containing protein | DUE52_20825 | Not Available | Negative | 5180465 - 5181865 | 52531.9 |
| duf4976 domain-containing protein | DUE52_20830 | Not Available | Negative | 5182079 - 5183551 | 56175.9 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_20835 | Not Available | Negative | 5183576 - 5185054 | 54933.0 |
| susc/raga family tonb-linked outer membrane protein | DUE52_20840 | Not Available | Negative | 5185071 - 5188586 | 128698.0 |
| duf4974 domain-containing protein | DUE52_20845 | Not Available | Negative | 5188640 - 5189632 | 37758.8 |
| sigma-70 family rna polymerase sigma factor | DUE52_20850 | Not Available | Negative | 5189681 - 5190310 | 24367.6 |
| dabb family protein | DUE52_20855 | Not Available | Negative | 5190955 - 5191242 | 11213.2 |
| sugar phosphate isomerase/epimerase | DUE52_20860 | Not Available | Negative | 5191852 - 5192721 | 32247.5 |
| duf1501 domain-containing protein | DUE52_20865 | Not Available | Negative | 5192965 - 5194464 | 55395.2 |
| duf1553 domain-containing protein | DUE52_20870 | Not Available | Negative | 5194470 - 5197214 | 103624.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
