Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sir2 family protein | DUE52_20620 | Not Available | Negative | 5140208 - 5141452 | 47416.3 |
| is3 family transposase | DUE52_20625 | Not Available | Negative | 5141600 - 5142436 | 32805.5 |
| transposase | DUE52_20630 | Not Available | Negative | 5142451 - 5142741 | 11177.6 |
| holo-[acyl-carrier-protein] synthase | DUE52_20635 | Not Available | Negative | 5143457 - 5143834 | 13847.8 |
| nucleotide pyrophosphohydrolase | DUE52_20640 | Not Available | Negative | 5143835 - 5144410 | 22285.5 |
| hypothetical protein | DUE52_20645 | Not Available | Negative | 5144407 - 5145273 | 32466.8 |
| hypothetical protein | DUE52_20650 | Not Available | Negative | 5145297 - 5146286 | 38237.9 |
| thymidylate synthase | DUE52_20655 | Not Available | Negative | 5146377 - 5147120 | 28737.5 |
| imma/irre family metallo-endopeptidase | DUE52_20660 | Not Available | Negative | 5147123 - 5147986 | 32506.3 |
| xre family transcriptional regulator | DUE52_20665 | Not Available | Negative | 5147986 - 5148327 | 12794.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
