Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formylglycine-generating enzyme family protein | DUE52_02005 | Not Available | Negative | 508810 - 509805 | 37227.1 |
| abc transporter atp-binding protein | DUE52_02010 | Not Available | Positive | 510061 - 511944 | 71386.2 |
| deda family protein | DUE52_02015 | Not Available | Positive | 512060 - 512713 | 24932.1 |
| transcriptional repressor | DUE52_02020 | Not Available | Negative | 512732 - 513232 | 18905.4 |
| hypothetical protein | DUE52_02025 | Not Available | Positive | 513537 - 513821 | 10432.6 |
| gamma carbonic anhydrase family protein | DUE52_02030 | Not Available | Negative | 513852 - 514361 | 18180.1 |
| sugar transporter | DUE52_02035 | Not Available | Positive | 514518 - 516938 | 90460.5 |
| lipopolysaccharide biosynthesis protein | DUE52_02040 | Not Available | Positive | 517011 - 518084 | 39918.2 |
| gdp-mannose 4,6-dehydratase | DUE52_02045 | Not Available | Positive | 518185 - 519162 | 36452.3 |
| flippase | DUE52_02050 | Not Available | Positive | 519176 - 520519 | 50297.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
