Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1593 domain-containing protein | DUE52_20520 | Not Available | Negative | 5111566 - 5112975 | 53442.0 |
| transketolase family protein | DUE52_20525 | Not Available | Negative | 5112988 - 5113962 | 34959.0 |
| transketolase | DUE52_20530 | Not Available | Negative | 5113983 - 5114810 | 30179.9 |
| fucose isomerase | DUE52_20535 | Not Available | Negative | 5114817 - 5116235 | 52011.1 |
| chaperonin groel | DUE52_20540 | Not Available | Negative | 5116544 - 5118178 | 57847.3 |
| co-chaperone groes | DUE52_20545 | Not Available | Negative | 5118274 - 5118567 | 10532.8 |
| hypothetical protein | DUE52_20550 | Not Available | Positive | 5118879 - 5119616 | 28565.4 |
| duf2911 domain-containing protein | DUE52_20555 | Not Available | Positive | 5119823 - 5120935 | 40844.7 |
| gnat family n-acetyltransferase | DUE52_20560 | Not Available | Negative | 5120992 - 5121858 | 32096.0 |
| hypothetical protein | DUE52_20565 | Not Available | Positive | 5122151 - 5122864 | 27332.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
