Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2490 domain-containing protein | DUE52_20420 | Not Available | Negative | 5085300 - 5086055 | 29535.9 |
| hypothetical protein | DUE52_20425 | Not Available | Positive | 5086644 - 5089811 | 118497.0 |
| hypothetical protein | DUE52_20430 | Not Available | Positive | 5089818 - 5092481 | 99143.1 |
| gnat family n-acetyltransferase | DUE52_20435 | Not Available | Positive | 5092469 - 5093050 | 22399.0 |
| hypothetical protein | DUE52_20440 | Not Available | Positive | 5093025 - 5095583 | 95196.7 |
| hypothetical protein | DUE52_20445 | Not Available | Positive | 5095605 - 5099276 | 137476.0 |
| duf4256 domain-containing protein | DUE52_20450 | Not Available | Negative | 5099303 - 5099866 | 21409.1 |
| doxx family protein | DUE52_20455 | Not Available | Negative | 5099914 - 5100303 | 14832.8 |
| atpase | DUE52_20460 | Not Available | Negative | 5100310 - 5100792 | 18619.6 |
| arsr family transcriptional regulator | DUE52_20465 | Not Available | Negative | 5100812 - 5101135 | 12517.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
