Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pepsy domain-containing protein | DUE52_20320 | Not Available | Positive | 5052990 - 5054201 | 44821.2 |
| hypothetical protein | DUE52_20325 | Not Available | Positive | 5054191 - 5054379 | 7020.82 |
| sensor histidine kinase | DUE52_20330 | Not Available | Positive | 5054486 - 5055781 | 48090.0 |
| gnat family n-acetyltransferase | DUE52_20335 | Not Available | Negative | 5055801 - 5056238 | 16720.6 |
| glycerophosphodiester phosphodiesterase | DUE52_20340 | Not Available | Negative | 5056246 - 5057031 | 28895.9 |
| metallophosphoesterase | DUE52_20345 | Not Available | Negative | 5057031 - 5058812 | 67244.5 |
| phopq-activated pathogenicity-like protein pqaa type | DUE52_20350 | Not Available | Negative | 5058924 - 5060300 | 51634.4 |
| hypothetical protein | DUE52_20355 | Not Available | Negative | 5060419 - 5061681 | 45304.2 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DUE52_20360 | Not Available | Negative | 5061777 - 5063417 | 59840.8 |
| susc/raga family tonb-linked outer membrane protein | DUE52_20365 | Not Available | Negative | 5063441 - 5066857 | 124519.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
