Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna epoxyqueuosine(34) reductase queg | DUE52_20170 | Not Available | Positive | 5011615 - 5012553 | 35420.3 |
| peptide-binding protein | DUE52_20175 | Not Available | Negative | 5012773 - 5015112 | 87281.1 |
| sugar phosphate isomerase/epimerase | DUE52_20180 | Not Available | Negative | 5015161 - 5016051 | 33456.9 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_20185 | Not Available | Negative | 5016162 - 5016938 | 27831.6 |
| zn-dependent alcohol dehydrogenase | DUE52_20190 | Not Available | Negative | 5017039 - 5018064 | 36816.5 |
| d-arabino 3-hexulose 6-phosphate aldehyde lyase | DUE52_20195 | Not Available | Negative | 5018205 - 5018909 | 25188.8 |
| aldolase | DUE52_20200 | Not Available | Positive | 5019119 - 5019937 | 29903.1 |
| gfo/idh/moca family oxidoreductase | DUE52_20205 | Not Available | Positive | 5020079 - 5021059 | 36613.5 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | DUE52_20210 | Not Available | Negative | 5021060 - 5022418 | 49834.1 |
| methylmalonate-semialdehyde dehydrogenase (coa acylating) | DUE52_20215 | Not Available | Negative | 5022451 - 5023923 | 52871.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
