Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_20120 | Not Available | Negative | 4997515 - 4997916 | 14837.8 |
| hypothetical protein | DUE52_20125 | Not Available | Negative | 4997935 - 4998438 | 19049.8 |
| hypothetical protein | DUE52_20130 | Not Available | Negative | 4998548 - 5000248 | 63759.3 |
| m3 family peptidase | DUE52_20135 | Not Available | Positive | 5000521 - 5002650 | 80741.2 |
| hypothetical protein | DUE52_20140 | Not Available | Negative | 5002749 - 5002997 | 8872.24 |
| duf2723 domain-containing protein | DUE52_20145 | Not Available | Positive | 5003311 - 5006343 | 114404.0 |
| sel1 repeat family protein | DUE52_20150 | Not Available | Negative | 5006717 - 5008180 | 54670.9 |
| hypothetical protein | DUE52_20155 | Not Available | Negative | 5008192 - 5009001 | 31155.9 |
| molecular chaperone dnaj | DUE52_20160 | Not Available | Negative | 5009590 - 5010732 | 41507.3 |
| nucleotide exchange factor grpe | DUE52_20165 | Not Available | Negative | 5010822 - 5011421 | 22205.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
