Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate--trna ligase | DUE52_00135 | Not Available | Positive | 30531 - 32300 | 67223.8 |
| dinb family protein | DUE52_00140 | Not Available | Negative | 32387 - 32923 | 20236.6 |
| molybdopterin-synthase adenylyltransferase moeb | DUE52_00145 | Not Available | Positive | 33097 - 34242 | 42730.7 |
| duf5110 domain-containing protein | DUE52_00150 | Not Available | Negative | 34562 - 36703 | 80383.4 |
| duf4595 domain-containing protein | DUE52_00155 | Not Available | Positive | 37010 - 37858 | 31830.3 |
| arac family transcriptional regulator | DUE52_00160 | Not Available | Positive | 37968 - 38870 | 35150.5 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_00165 | Not Available | Positive | 38955 - 39815 | 31206.8 |
| carbohydrate-binding protein | DUE52_00170 | Not Available | Negative | 39894 - 41273 | 52192.3 |
| amidohydrolase | DUE52_00175 | Not Available | Positive | 41388 - 42749 | 50399.0 |
| hypothetical protein | DUE52_00180 | Not Available | Positive | 42804 - 43517 | 27759.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
