Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DUE52_20070 | Not Available | Positive | 4989586 - 4990215 | 23946.1 |
| response regulator | DUE52_20075 | Not Available | Positive | 4990387 - 4990812 | 16382.7 |
| sgnh/gdsl hydrolase family protein | DUE52_20080 | Not Available | Positive | 4990976 - 4991656 | 25370.2 |
| port family protein | DUE52_20085 | Not Available | Positive | 4991908 - 4992912 | 36270.9 |
| mfs transporter | DUE52_20090 | Not Available | Positive | 4993030 - 4994265 | 44287.4 |
| glyoxalase/bleomycin resistance/extradiol dioxygenase family protein | DUE52_20095 | Not Available | Negative | 4994352 - 4994783 | 15925.8 |
| hypothetical protein | DUE52_20100 | Not Available | Positive | 4994972 - 4995499 | 18177.8 |
| nuclear transport factor 2 family protein | DUE52_20105 | Not Available | Positive | 4995544 - 4995996 | 16532.5 |
| hypothetical protein | DUE52_20110 | Not Available | Positive | 4996253 - 4996648 | 14286.2 |
| ion transporter | DUE52_20115 | Not Available | Negative | 4996832 - 4997518 | 25740.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
