Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_20020 | Not Available | Negative | 4972098 - 4973450 | 49543.8 |
| dehydrogenase | DUE52_20025 | Not Available | Negative | 4973615 - 4976668 | 111335.0 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_20030 | Not Available | Negative | 4976673 - 4978319 | 61026.4 |
| tonb-dependent receptor | DUE52_20035 | Not Available | Negative | 4978341 - 4981790 | 126222.0 |
| duf4974 domain-containing protein | DUE52_20040 | Not Available | Negative | 4981846 - 4982850 | 38348.2 |
| rna polymerase sigma-70 factor | DUE52_20045 | Not Available | Negative | 4982920 - 4983645 | 28124.7 |
| arabinose isomerase | DUE52_20050 | Not Available | Positive | 4983850 - 4985343 | 54235.0 |
| arac family transcriptional regulator | DUE52_20055 | Not Available | Positive | 4985571 - 4986131 | 21316.0 |
| duf3494 domain-containing protein | DUE52_20060 | Not Available | Positive | 4986229 - 4987455 | 42666.7 |
| polysaccharide biosynthesis protein | DUE52_20065 | Not Available | Positive | 4987618 - 4989540 | 71945.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
