Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dj-1/pfpi family protein | DUE52_19970 | Not Available | Positive | 4958609 - 4959178 | 21494.6 |
| hypothetical protein | DUE52_19975 | Not Available | Negative | 4959276 - 4959539 | 10178.3 |
| hypothetical protein | DUE52_19980 | Not Available | Negative | 4959576 - 4959764 | 7693.18 |
| hypothetical protein | DUE52_19985 | Not Available | Negative | 4960005 - 4962104 | 81873.4 |
| pkd domain-containing protein | DUE52_19990 | Not Available | Negative | 4962238 - 4965609 | 124820.0 |
| gfo/idh/moca family oxidoreductase | DUE52_19995 | Not Available | Negative | 4965809 - 4967131 | 49681.4 |
| hypothetical protein | DUE52_20000 | Not Available | Positive | 4967332 - 4967865 | 19883.3 |
| sgnh/gdsl hydrolase family protein | DUE52_20005 | Not Available | Negative | 4967924 - 4969867 | 72928.9 |
| galactose mutarotase | DUE52_20010 | Not Available | Negative | 4969964 - 4971127 | 42552.6 |
| polysaccharide deacetylase | DUE52_20015 | Not Available | Negative | 4971233 - 4971985 | 27620.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
