Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DUE52_19920 | Not Available | Negative | 4948505 - 4949425 | 35637.3 |
| aldo/keto reductase | DUE52_19925 | Not Available | Negative | 4949492 - 4950502 | 37029.3 |
| class a beta-lactamase-related serine hydrolase | DUE52_19930 | Not Available | Negative | 4950656 - 4952530 | 69817.7 |
| m20/m25/m40 family metallo-hydrolase | DUE52_19935 | Not Available | Negative | 4952639 - 4953571 | 34207.0 |
| hypothetical protein | DUE52_19940 | Not Available | Negative | 4953678 - 4954058 | 14112.6 |
| hypothetical protein | DUE52_19945 | Not Available | Negative | 4954150 - 4954650 | 17423.0 |
| hypothetical protein | DUE52_19950 | Not Available | Negative | 4954684 - 4955136 | 16175.0 |
| dna-binding response regulator | DUE52_19955 | Not Available | Negative | 4955237 - 4955872 | 23367.3 |
| histidine kinase | DUE52_19960 | Not Available | Negative | 4955869 - 4957863 | 75061.9 |
| hypothetical protein | DUE52_19965 | Not Available | Negative | 4957938 - 4958216 | 10650.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
