Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serpin family protein | DUE52_19815 | Not Available | Positive | 4922855 - 4924102 | 45479.2 |
| meta domain-containing protein | DUE52_19820 | Not Available | Positive | 4924099 - 4924551 | 16034.4 |
| hypothetical protein | DUE52_19825 | Not Available | Positive | 4924752 - 4926047 | 48425.7 |
| hypothetical protein | DUE52_19830 | Not Available | Positive | 4926059 - 4926649 | 22047.6 |
| hypothetical protein | DUE52_19835 | Not Available | Positive | 4926653 - 4926856 | 7339.97 |
| translational gtpase typa | DUE52_19840 | Not Available | Negative | 4926895 - 4928709 | 68027.7 |
| hypothetical protein | DUE52_19845 | Not Available | Negative | 4928917 - 4929126 | 7715.94 |
| dienelactone hydrolase family protein | DUE52_19850 | Not Available | Negative | 4929717 - 4930565 | 30905.1 |
| metallophosphoesterase | DUE52_19855 | Not Available | Negative | 4930700 - 4931977 | 47924.9 |
| acrb/acrd/acrf family protein | DUE52_19860 | Not Available | Negative | 4932048 - 4935473 | 126700.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
