Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf72 domain-containing protein | DUE52_19765 | Not Available | Negative | 4907276 - 4908202 | 35550.4 |
| valine--trna ligase | DUE52_19770 | Not Available | Positive | 4908383 - 4911058 | 102242.0 |
| ompa family protein | DUE52_19775 | Not Available | Negative | 4911166 - 4912269 | 41737.2 |
| had family hydrolase | DUE52_19780 | Not Available | Positive | 4912450 - 4912971 | 19437.4 |
| arginine decarboxylase | DUE52_19785 | Not Available | Negative | 4913172 - 4914659 | 57261.9 |
| peptidoglycan synthetase | DUE52_19790 | Not Available | Positive | 4914991 - 4916346 | 50574.3 |
| dehydrogenase | DUE52_19795 | Not Available | Negative | 4916439 - 4919228 | 102576.0 |
| sugar phosphate isomerase/epimerase | DUE52_19800 | Not Available | Negative | 4919484 - 4920362 | 32393.9 |
| rna polymerase sigma factor | DUE52_19805 | Not Available | Positive | 4920500 - 4921045 | 21149.4 |
| hypothetical protein | DUE52_19810 | Not Available | Positive | 4921042 - 4922730 | 61276.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
