Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dinb family protein | DUE52_19715 | Not Available | Positive | 4898758 - 4899363 | 23498.9 |
| ompa family protein | DUE52_19720 | Not Available | Negative | 4899477 - 4901054 | 57410.5 |
| tigr00730 family rossman fold protein | DUE52_19725 | Not Available | Negative | 4901473 - 4902027 | 20554.1 |
| hypothetical protein | DUE52_19730 | Not Available | Negative | 4902079 - 4902858 | 29009.7 |
| phage holin family protein | DUE52_19735 | Not Available | Negative | 4902982 - 4903317 | 11754.3 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | DUE52_19740 | Not Available | Negative | 4903415 - 4904014 | 22508.0 |
| imidazole glycerol phosphate synthase subunit hisf | DUE52_19745 | Not Available | Negative | 4904034 - 4904795 | 26879.3 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | DUE52_19750 | Not Available | Negative | 4904909 - 4905628 | 26667.1 |
| imidazole glycerol phosphate synthase subunit hish | DUE52_19755 | Not Available | Negative | 4905698 - 4906297 | 22231.7 |
| hypothetical protein | DUE52_19760 | Not Available | Negative | 4906473 - 4907141 | 24748.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
