Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ahpc/tsa family protein | DUE52_19615 | Not Available | Negative | 4873753 - 4874901 | 41889.8 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | DUE52_19620 | Not Available | Negative | 4874914 - 4876413 | 55474.3 |
| hypothetical protein | DUE52_19625 | Not Available | Positive | 4876780 - 4877205 | 16068.6 |
| phytoene/squalene synthase family protein | DUE52_19630 | Not Available | Negative | 4877253 - 4878089 | 32822.4 |
| phytoene desaturase | DUE52_19635 | Not Available | Negative | 4878160 - 4879641 | 55780.8 |
| rna polymerase sigma factor | DUE52_19640 | Not Available | Negative | 4879911 - 4880423 | 19830.7 |
| tonb-dependent receptor | DUE52_19645 | Not Available | Positive | 4880847 - 4883144 | 85832.0 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_19650 | Not Available | Negative | 4883141 - 4883971 | 30273.0 |
| hypothetical protein | DUE52_19655 | Not Available | Negative | 4883968 - 4885395 | 52298.5 |
| hypothetical protein | DUE52_19660 | Not Available | Positive | 4885700 - 4886446 | 28896.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
