Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | DUE52_01905 | Not Available | Negative | 482315 - 482986 | 26147.2 |
| hypothetical protein | DUE52_01910 | Not Available | Positive | 483201 - 483593 | 15325.0 |
| 6-bladed beta-propeller | DUE52_01915 | Not Available | Positive | 483634 - 484701 | 39519.7 |
| ribonuclease inhibitor | DUE52_01920 | Not Available | Positive | 484877 - 486403 | 54934.8 |
| duf1553 domain-containing protein | DUE52_01925 | Not Available | Positive | 486538 - 490014 | 131382.0 |
| duf1501 domain-containing protein | DUE52_01930 | Not Available | Positive | 490132 - 491580 | 54402.0 |
| isopropylmalate/homocitrate/citramalate synthase | DUE52_01935 | Not Available | Positive | 491620 - 492021 | 15227.9 |
| gnat family n-acetyltransferase | DUE52_01940 | Not Available | Positive | 492033 - 492626 | 22951.2 |
| mechanosensitive ion channel protein mscs | DUE52_01945 | Not Available | Positive | 492715 - 493824 | 42604.1 |
| arac family transcriptional regulator | DUE52_01950 | Not Available | Negative | 493837 - 494931 | 41719.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
