Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | DUE52_19565 | Not Available | Negative | 4863438 - 4864451 | 37641.1 |
| gfo/idh/moca family oxidoreductase | DUE52_19570 | Not Available | Positive | 4864561 - 4865958 | 52372.8 |
| glucosamine-6-phosphate deaminase | DUE52_19575 | Not Available | Positive | 4866032 - 4866787 | 27961.3 |
| hypothetical protein | DUE52_19580 | Not Available | Negative | 4866772 - 4866990 | 8292.08 |
| 8-amino-7-oxononanoate synthase | DUE52_19585 | Not Available | Positive | 4867033 - 4868169 | 41358.7 |
| dethiobiotin synthase | DUE52_19590 | Not Available | Positive | 4868251 - 4868895 | 23468.2 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | DUE52_19595 | Not Available | Positive | 4868945 - 4870258 | 48262.8 |
| aquaporin family protein | DUE52_19600 | Not Available | Negative | 4870555 - 4871280 | 24834.9 |
| adenylosuccinate lyase | DUE52_19605 | Not Available | Positive | 4871434 - 4872774 | 50691.0 |
| pyrroline-5-carboxylate reductase | DUE52_19610 | Not Available | Negative | 4872854 - 4873657 | 28712.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
