Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf86 domain-containing protein | DUE52_19515 | Not Available | Negative | 4852986 - 4853336 | 14042.4 |
| nucleotidyltransferase | DUE52_19520 | Not Available | Negative | 4853317 - 4853634 | 12308.7 |
| threonine dehydratase | DUE52_19525 | Not Available | Negative | 4853647 - 4854915 | 46825.6 |
| ketol-acid reductoisomerase | DUE52_19530 | Not Available | Negative | 4855075 - 4856118 | 38614.7 |
| hypothetical protein | DUE52_19535 | Not Available | Negative | 4856159 - 4857301 | 43526.1 |
| acetolactate synthase small subunit | DUE52_19540 | Not Available | Negative | 4857337 - 4857870 | 20777.3 |
| biosynthetic-type acetolactate synthase large subunit | DUE52_19545 | Not Available | Negative | 4857920 - 4859683 | 64268.9 |
| dihydroxy-acid dehydratase | DUE52_19550 | Not Available | Negative | 4859740 - 4861446 | 60588.8 |
| n-acetylmuramic acid 6-phosphate etherase | DUE52_19555 | Not Available | Positive | 4861613 - 4862413 | 28390.3 |
| alcohol dehydrogenase | DUE52_19560 | Not Available | Positive | 4862410 - 4863429 | 36243.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
