Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde reductase | DUE52_19415 | Not Available | Positive | 4825006 - 4825968 | 34702.3 |
| arac family transcriptional regulator | DUE52_19420 | Not Available | Positive | 4826148 - 4826951 | 31477.6 |
| hypothetical protein | DUE52_19425 | Not Available | Negative | 4827039 - 4827695 | 24258.0 |
| alpha/beta hydrolase | DUE52_19430 | Not Available | Positive | 4828026 - 4828847 | 30292.9 |
| helix-turn-helix domain-containing protein | DUE52_19435 | Not Available | Positive | 4829049 - 4830974 | 72638.1 |
| hypothetical protein | DUE52_19440 | Not Available | Positive | 4831078 - 4831623 | 20605.9 |
| hypothetical protein | DUE52_19445 | Not Available | Positive | 4831642 - 4836591 | 168617.0 |
| sigma-70 family rna polymerase sigma factor | DUE52_19450 | Not Available | Positive | 4836676 - 4837188 | 19649.7 |
| hypothetical protein | DUE52_19455 | Not Available | Positive | 4837191 - 4837886 | 26733.9 |
| cupin domain-containing protein | DUE52_19460 | Not Available | Negative | 4837867 - 4838451 | 22198.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
