Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsr family transcriptional regulator | DUE52_19360 | Not Available | Positive | 4817030 - 4817362 | 12880.7 |
| srpbcc domain-containing protein | DUE52_19365 | Not Available | Positive | 4817352 - 4817852 | 19254.8 |
| transcriptional regulator | DUE52_19370 | Not Available | Negative | 4817999 - 4818364 | 14136.2 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_19375 | Not Available | Positive | 4818485 - 4819246 | 26409.6 |
| crp/fnr family transcriptional regulator | DUE52_19380 | Not Available | Positive | 4819486 - 4820049 | 22199.0 |
| nad-dependent epimerase/dehydratase family protein | DUE52_19390 | Not Available | Positive | 4820946 - 4821842 | 33365.6 |
| duf2200 domain-containing protein | DUE52_19395 | Not Available | Positive | 4821999 - 4822364 | 14116.1 |
| hypothetical protein | DUE52_19400 | Not Available | Positive | 4822495 - 4823364 | 32680.5 |
| crp/fnr family transcriptional regulator | DUE52_19405 | Not Available | Positive | 4823400 - 4823975 | 22755.3 |
| nmra family transcriptional regulator | DUE52_19410 | Not Available | Positive | 4824048 - 4824800 | 26693.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
