Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_19310 | Not Available | Positive | 4809276 - 4811639 | 89905.8 |
| duf2809 domain-containing protein | DUE52_19315 | Not Available | Positive | 4811823 - 4812224 | 15420.4 |
| hypothetical protein | DUE52_19320 | Not Available | Positive | 4812348 - 4812572 | 8398.23 |
| putative toxin-antitoxin system toxin component, pin family | DUE52_19325 | Not Available | Positive | 4812553 - 4812966 | 15727.1 |
| crp/fnr family transcriptional regulator | DUE52_19330 | Not Available | Positive | 4813097 - 4813663 | 21717.1 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_19335 | Not Available | Positive | 4813743 - 4814480 | 26624.6 |
| transcriptional repressor | DUE52_19340 | Not Available | Negative | 4814559 - 4814933 | 14185.4 |
| hypothetical protein | DUE52_19345 | Not Available | Positive | 4815046 - 4815321 | 10321.5 |
| class i sam-dependent methyltransferase | DUE52_19350 | Not Available | Positive | 4815335 - 4815946 | 23420.2 |
| doxx family protein | DUE52_19355 | Not Available | Negative | 4816051 - 4816773 | 27188.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
