Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s9 | DUE52_19210 | Not Available | Negative | 4784201 - 4784587 | 14476.7 |
| 50s ribosomal protein l13 | DUE52_19215 | Not Available | Negative | 4784673 - 4785122 | 16776.4 |
| hypothetical protein | DUE52_19220 | Not Available | Negative | 4785249 - 4785698 | 17887.8 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | DUE52_19225 | Not Available | Negative | 4785740 - 4786957 | 45158.2 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | DUE52_19230 | Not Available | Negative | 4787113 - 4788567 | 53689.4 |
| pasta domain-containing protein | DUE52_19235 | Not Available | Negative | 4788599 - 4790779 | 81578.7 |
| hypothetical protein | DUE52_19240 | Not Available | Negative | 4790776 - 4791177 | 15514.0 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | DUE52_19245 | Not Available | Negative | 4791265 - 4792212 | 35136.1 |
| tlpa family protein disulfide reductase | DUE52_19250 | Not Available | Positive | 4792413 - 4793642 | 45378.3 |
| mfs transporter | DUE52_19255 | Not Available | Positive | 4793766 - 4795046 | 46340.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
