Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyttr family transcriptional regulator | DUE52_19160 | Not Available | Negative | 4775747 - 4776103 | 13992.9 |
| lyttr family transcriptional regulator | DUE52_19165 | Not Available | Negative | 4776191 - 4776568 | 14050.0 |
| dna-binding response regulator | DUE52_19170 | Not Available | Positive | 4776778 - 4777560 | 29723.2 |
| hypothetical protein | DUE52_19175 | Not Available | Positive | 4777582 - 4779462 | 72120.0 |
| duf3078 domain-containing protein | DUE52_19180 | Not Available | Negative | 4779459 - 4780355 | 33647.0 |
| hypothetical protein | DUE52_19185 | Not Available | Negative | 4780391 - 4781218 | 30011.6 |
| hypothetical protein | DUE52_19190 | Not Available | Negative | 4781235 - 4781435 | 7422.92 |
| sigma-70 family rna polymerase sigma factor | DUE52_19195 | Not Available | Negative | 4781452 - 4782063 | 24355.4 |
| elongation factor ts | DUE52_19200 | Not Available | Negative | 4782267 - 4783100 | 29686.7 |
| 30s ribosomal protein s2 | DUE52_19205 | Not Available | Negative | 4783274 - 4784116 | 31638.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
