Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylosidase | DUE52_19110 | Not Available | Negative | 4757124 - 4758410 | 48522.6 |
| cytochrome c | DUE52_19115 | Not Available | Negative | 4758506 - 4760746 | 82818.8 |
| glycoside hydrolase family 95 protein | DUE52_19120 | Not Available | Negative | 4760774 - 4763263 | 91471.1 |
| galactose oxidase | DUE52_19125 | Not Available | Negative | 4763504 - 4766161 | 100842.0 |
| tonb-dependent receptor | DUE52_19130 | Not Available | Positive | 4766408 - 4769683 | 121406.0 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_19135 | Not Available | Positive | 4769697 - 4771487 | 66675.4 |
| duf3823 domain-containing protein | DUE52_19140 | Not Available | Positive | 4771500 - 4772234 | 27079.1 |
| hypothetical protein | DUE52_19145 | Not Available | Negative | 4772313 - 4773458 | 43209.3 |
| dna-formamidopyrimidine glycosylase | DUE52_19150 | Not Available | Negative | 4773615 - 4774448 | 31942.4 |
| hypothetical protein | DUE52_19155 | Not Available | Positive | 4774734 - 4775672 | 34621.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
