Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tldd/pmba family protein | DUE52_01855 | Not Available | Negative | 465088 - 466731 | 60048.2 |
| sgnh/gdsl hydrolase family protein | DUE52_01860 | Not Available | Negative | 466906 - 468168 | 46923.1 |
| right-handed parallel beta-helix repeat-containing protein | DUE52_01865 | Not Available | Negative | 468279 - 470384 | 78390.0 |
| hypothetical protein | DUE52_01870 | Not Available | Negative | 470480 - 471649 | 44379.9 |
| pepsy domain-containing protein | DUE52_01875 | Not Available | Negative | 471968 - 473212 | 47646.8 |
| tonb-dependent siderophore receptor | DUE52_01880 | Not Available | Negative | 473268 - 475631 | 86687.4 |
| alpha/beta hydrolase | DUE52_01885 | Not Available | Positive | 476188 - 476592 | 14548.0 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_01890 | Not Available | Negative | 476655 - 477624 | 35182.8 |
| tonb-dependent receptor | DUE52_01895 | Not Available | Negative | 477688 - 480924 | 118128.0 |
| duf4974 domain-containing protein | DUE52_01900 | Not Available | Negative | 481256 - 482257 | 38353.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
