Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent helicase | DUE52_19060 | Not Available | Negative | 4746093 - 4747478 | 51695.9 |
| ketosamine-3-kinase | DUE52_19065 | Not Available | Negative | 4747617 - 4748495 | 33589.8 |
| transposase | DUE52_19070 | Not Available | Negative | 4748617 - 4749738 | 42087.9 |
| anhydro-n-acetylmuramic acid kinase | DUE52_19075 | Not Available | Positive | 4749872 - 4751071 | 43663.0 |
| l-2-hydroxyglutarate oxidase | DUE52_19080 | Not Available | Positive | 4751234 - 4752430 | 44378.6 |
| hypothetical protein | DUE52_19085 | Not Available | Positive | 4752564 - 4753403 | 31159.5 |
| aldose 1-epimerase family protein | DUE52_19090 | Not Available | Negative | 4753459 - 4754325 | 32914.9 |
| mfs transporter | DUE52_19095 | Not Available | Positive | 4754402 - 4755652 | 44978.6 |
| hypothetical protein | DUE52_19100 | Not Available | Positive | 4755660 - 4756175 | 19948.9 |
| thiopurine s-methyltransferase | DUE52_19105 | Not Available | Positive | 4756422 - 4757114 | 26833.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
