Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4249 domain-containing protein | DUE52_19010 | Not Available | Negative | 4734688 - 4735827 | 42100.6 |
| tonb-dependent receptor | DUE52_19015 | Not Available | Negative | 4735830 - 4738601 | 104632.0 |
| hypothetical protein | DUE52_19020 | Not Available | Negative | 4738598 - 4739305 | 27174.6 |
| hypothetical protein | DUE52_19025 | Not Available | Positive | 4739865 - 4740032 | 6474.0 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DUE52_19030 | Not Available | Positive | 4740467 - 4741393 | 35032.2 |
| polyprenyl synthetase family protein | DUE52_19035 | Not Available | Positive | 4741457 - 4742440 | 36989.6 |
| rhomboid family intramembrane serine protease | DUE52_19040 | Not Available | Positive | 4742488 - 4743108 | 23225.8 |
| lyttr family transcriptional regulator | DUE52_19045 | Not Available | Positive | 4743187 - 4744062 | 33062.6 |
| duf2306 domain-containing protein | DUE52_19050 | Not Available | Positive | 4744216 - 4744929 | 26709.6 |
| hypothetical protein | DUE52_19055 | Not Available | Negative | 4745249 - 4746022 | 29077.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
