Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipase | DUE52_18905 | Not Available | Positive | 4705243 - 4705908 | 24382.2 |
| hypothetical protein | DUE52_18910 | Not Available | Positive | 4705922 - 4706218 | 11415.2 |
| barnase inhibitor | DUE52_18915 | Not Available | Positive | 4706250 - 4706687 | 16910.7 |
| transcription-repair coupling factor | DUE52_18920 | Not Available | Positive | 4706781 - 4710134 | 127205.0 |
| gliding motility lipoprotein gldj | DUE52_18925 | Not Available | Positive | 4710225 - 4711502 | 47781.9 |
| comf family protein | DUE52_18930 | Not Available | Negative | 4711539 - 4712165 | 23381.1 |
| hypothetical protein | DUE52_18935 | Not Available | Positive | 4712392 - 4712751 | 13917.7 |
| atpase | DUE52_18940 | Not Available | Positive | 4712905 - 4716360 | 133416.0 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | DUE52_18945 | Not Available | Positive | 4716534 - 4718396 | 69600.7 |
| class i sam-dependent methyltransferase | DUE52_18950 | Not Available | Positive | 4718399 - 4719289 | 34351.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
