Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_18855 | Not Available | Positive | 4692677 - 4693009 | 12660.3 |
| hypothetical protein | DUE52_18860 | Not Available | Negative | 4693120 - 4694805 | 62649.5 |
| dihydrolipoyl dehydrogenase | DUE52_18865 | Not Available | Negative | 4695021 - 4696421 | 49932.2 |
| hypothetical protein | DUE52_18870 | Not Available | Positive | 4696607 - 4697464 | 33074.6 |
| peptide chain release factor 2 | DUE52_18875 | Not Available | Positive | 4697598 - 4698675 | 40582.4 |
| alpha/beta fold hydrolase | DUE52_18880 | Not Available | Positive | 4698751 - 4699509 | 29093.6 |
| hypothetical protein | DUE52_18885 | Not Available | Negative | 4699506 - 4700183 | 24863.1 |
| cystathionine gamma-synthase | DUE52_18890 | Not Available | Positive | 4700250 - 4701389 | 41452.0 |
| tonb-dependent receptor | DUE52_18895 | Not Available | Negative | 4701481 - 4703862 | 88295.2 |
| ring-cleaving dioxygenase | DUE52_18900 | Not Available | Positive | 4704223 - 4705164 | 34995.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
