Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium transporter | DUE52_18755 | Not Available | Negative | 4663002 - 4664666 | 60725.6 |
| duf4421 domain-containing protein | DUE52_18760 | Not Available | Negative | 4664802 - 4665875 | 40466.0 |
| hypothetical protein | DUE52_18765 | Not Available | Negative | 4665872 - 4668706 | 106429.0 |
| formyltetrahydrofolate deformylase | DUE52_18770 | Not Available | Negative | 4668793 - 4669632 | 32133.7 |
| glycogen synthase | DUE52_18775 | Not Available | Positive | 4669741 - 4671555 | 70031.0 |
| duf349 domain-containing protein | DUE52_18780 | Not Available | Negative | 4671679 - 4673049 | 53895.6 |
| energy-dependent translational throttle protein etta | DUE52_18785 | Not Available | Positive | 4673121 - 4674788 | 62426.4 |
| aminotransferase iv | DUE52_18790 | Not Available | Positive | 4674842 - 4675666 | 31479.9 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | DUE52_18795 | Not Available | Negative | 4675732 - 4676286 | 20576.6 |
| n-acyl-d-glucosamine 2-epimerase | DUE52_18800 | Not Available | Positive | 4676420 - 4677631 | 46484.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
