Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair endonuclease mutl | DUE52_18705 | Not Available | Negative | 4651800 - 4653749 | 72319.0 |
| rlua family pseudouridine synthase | DUE52_18710 | Not Available | Negative | 4654286 - 4655011 | 27965.9 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | DUE52_18715 | Not Available | Negative | 4655089 - 4655907 | 29653.9 |
| peptidase m23 | DUE52_18720 | Not Available | Negative | 4656042 - 4657487 | 54909.6 |
| duf4292 domain-containing protein | DUE52_18725 | Not Available | Negative | 4657506 - 4658357 | 32209.9 |
| hypothetical protein | DUE52_18730 | Not Available | Negative | 4658350 - 4660107 | 66795.8 |
| atp-binding protein | DUE52_18735 | Not Available | Negative | 4660374 - 4661018 | 24719.7 |
| beta-carotene hydroxylase | DUE52_18740 | Not Available | Positive | 4661223 - 4661666 | 17389.4 |
| duf2795 domain-containing protein | DUE52_18745 | Not Available | Negative | 4661746 - 4661967 | 8686.74 |
| copper homeostasis protein cutc | DUE52_18750 | Not Available | Positive | 4662165 - 4662908 | 26170.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
