Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DUE52_18655 | Not Available | Positive | 4632384 - 4633724 | 48155.0 |
| tonb-dependent receptor | DUE52_18660 | Not Available | Positive | 4633899 - 4636958 | 111767.0 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_18665 | Not Available | Positive | 4636988 - 4638556 | 57988.0 |
| rna-binding protein | DUE52_18670 | Not Available | Positive | 4638724 - 4642032 | 122262.0 |
| duf1553 domain-containing protein | DUE52_18675 | Not Available | Positive | 4642141 - 4644912 | 104528.0 |
| duf1501 domain-containing protein | DUE52_18680 | Not Available | Positive | 4644914 - 4646428 | 55785.6 |
| aspartate kinase | DUE52_18685 | Not Available | Negative | 4646415 - 4647707 | 48994.3 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DUE52_18690 | Not Available | Negative | 4647846 - 4649780 | 71053.4 |
| rhomboid family intramembrane serine protease | DUE52_18695 | Not Available | Negative | 4650066 - 4650986 | 34161.9 |
| rhomboid family intramembrane serine protease | DUE52_18700 | Not Available | Negative | 4650990 - 4651766 | 29056.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
