Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtpase era | DUE52_18605 | Not Available | Positive | 4614625 - 4615542 | 35290.8 |
| ribosome biogenesis gtpase der | DUE52_18610 | Not Available | Positive | 4615587 - 4616894 | 48962.2 |
| dmt family transporter | DUE52_18615 | Not Available | Positive | 4616891 - 4617814 | 33558.6 |
| transcriptional regulator | DUE52_18620 | Not Available | Positive | 4617981 - 4618289 | 11862.7 |
| holliday junction branch migration dna helicase ruvb | DUE52_18625 | Not Available | Negative | 4618328 - 4619356 | 37596.3 |
| pkd domain-containing protein | DUE52_18630 | Not Available | Negative | 4619468 - 4623559 | 145795.0 |
| type ix secretion system membrane protein porp/sprf | DUE52_18635 | Not Available | Positive | 4623810 - 4624844 | 38344.4 |
| beta-galactosidase | DUE52_18640 | Not Available | Positive | 4625022 - 4627907 | 108056.0 |
| duf5107 domain-containing protein | DUE52_18645 | Not Available | Positive | 4627931 - 4631404 | 131617.0 |
| arac family transcriptional regulator | DUE52_18650 | Not Available | Negative | 4631401 - 4632282 | 33962.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
