Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | DUE52_18555 | Not Available | Positive | 4604362 - 4605117 | 29291.8 |
| class i sam-dependent methyltransferase | DUE52_18560 | Not Available | Positive | 4605114 - 4605818 | 27233.9 |
| glycosyltransferase family 2 protein | DUE52_18565 | Not Available | Negative | 4605822 - 4606880 | 40123.3 |
| hypothetical protein | DUE52_18570 | Not Available | Negative | 4606873 - 4608957 | 78636.4 |
| duf2304 domain-containing protein | DUE52_18575 | Not Available | Negative | 4609026 - 4609427 | 15155.3 |
| glycosyltransferase family 2 protein | DUE52_18580 | Not Available | Negative | 4609431 - 4610150 | 27410.4 |
| upf0104 family protein | DUE52_18585 | Not Available | Positive | 4610297 - 4611289 | 35838.0 |
| peptidase m28 | DUE52_18590 | Not Available | Positive | 4611419 - 4613014 | 58930.7 |
| duf2911 domain-containing protein | DUE52_18595 | Not Available | Negative | 4613297 - 4614145 | 30820.2 |
| Trna-met | Not Available | Not Available | Positive | 4614421 - 4614496 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
