Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_18505 | Not Available | Negative | 4594112 - 4594570 | 16307.9 |
| phage holin family protein | DUE52_18510 | Not Available | Negative | 4594660 - 4595085 | 16196.9 |
| trar/dksa family transcriptional regulator | DUE52_18515 | Not Available | Negative | 4595295 - 4595678 | 14541.2 |
| glu/leu/phe/val dehydrogenase | DUE52_18520 | Not Available | Positive | 4596069 - 4597289 | 43929.1 |
| phosphatidylserine decarboxylase family protein | DUE52_18525 | Not Available | Positive | 4597472 - 4598131 | 24791.5 |
| hypothetical protein | DUE52_18530 | Not Available | Positive | 4598144 - 4598533 | 14608.3 |
| hypothetical protein | DUE52_18535 | Not Available | Negative | 4598563 - 4599954 | 54576.2 |
| hypothetical protein | DUE52_18540 | Not Available | Positive | 4600079 - 4600288 | 7629.57 |
| glycine dehydrogenase (aminomethyl-transferring) | DUE52_18545 | Not Available | Negative | 4600434 - 4603322 | 105954.0 |
| glycosyltransferase family 2 protein | DUE52_18550 | Not Available | Positive | 4603510 - 4604337 | 31671.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
