Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1801 domain-containing protein | DUE52_18455 | Not Available | Negative | 4584170 - 4584592 | 15739.7 |
| microcystin degradation protein mlrc | DUE52_18460 | Not Available | Positive | 4584747 - 4586315 | 57188.3 |
| hypothetical protein | DUE52_18465 | Not Available | Negative | 4586335 - 4586916 | 21674.3 |
| cpbp family intramembrane metalloprotease | DUE52_18470 | Not Available | Negative | 4586962 - 4587900 | 36589.6 |
| polysaccharide deacetylase | DUE52_18475 | Not Available | Negative | 4588006 - 4589007 | 38011.7 |
| dmt family transporter | DUE52_18480 | Not Available | Positive | 4588970 - 4589863 | 32765.2 |
| nadph:quinone oxidoreductase family protein | DUE52_18485 | Not Available | Positive | 4589873 - 4590862 | 35342.9 |
| acyl-coa dehydrogenase | DUE52_18490 | Not Available | Positive | 4590977 - 4592146 | 42434.8 |
| arac family transcriptional regulator | DUE52_18495 | Not Available | Positive | 4592318 - 4593244 | 35356.9 |
| geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase | DUE52_18500 | Not Available | Negative | 4593364 - 4594149 | 28009.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
