Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase carboxyltransferase subunit beta | DUE52_18355 | Not Available | Positive | 4565344 - 4566186 | 31093.6 |
| duf4160 domain-containing protein | DUE52_18360 | Not Available | Positive | 4566196 - 4566426 | 8958.72 |
| duf2442 domain-containing protein | DUE52_18365 | Not Available | Positive | 4566434 - 4566691 | 9784.47 |
| radical sam protein | DUE52_18370 | Not Available | Positive | 4566696 - 4567673 | 37414.3 |
| sensor protein lyts | DUE52_18375 | Not Available | Negative | 4567719 - 4569140 | 53864.9 |
| t9ss c-terminal target domain-containing protein | DUE52_18380 | Not Available | Negative | 4569279 - 4570391 | 40660.2 |
| enoyl-coa hydratase | DUE52_18385 | Not Available | Positive | 4570514 - 4571335 | 29908.1 |
| hypothetical protein | DUE52_18390 | Not Available | Negative | 4571437 - 4571895 | 16621.1 |
| acetyl-coa carboxylase biotin carboxylase subunit | DUE52_18395 | Not Available | Negative | 4572145 - 4573488 | 48992.8 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | DUE52_18400 | Not Available | Negative | 4573602 - 4574072 | 16850.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
