Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large-conductance mechanosensitive channel protein mscl | DUE52_18305 | Not Available | Positive | 4554371 - 4554694 | 11672.6 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | DUE52_18310 | Not Available | Positive | 4554827 - 4556185 | 49772.8 |
| cell division protein ftsw | DUE52_18315 | Not Available | Positive | 4556263 - 4557399 | 41704.8 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | DUE52_18320 | Not Available | Positive | 4557465 - 4558562 | 39339.3 |
| udp-n-acetylmuramate--l-alanine ligase | DUE52_18325 | Not Available | Positive | 4558726 - 4560108 | 50994.0 |
| hypothetical protein | DUE52_18330 | Not Available | Positive | 4560141 - 4560917 | 29914.2 |
| cell division protein ftsa | DUE52_18335 | Not Available | Positive | 4560914 - 4562338 | 50509.4 |
| cell division protein ftsz | DUE52_18340 | Not Available | Positive | 4562417 - 4563829 | 51651.7 |
| nadph-dependent oxidoreductase | DUE52_18345 | Not Available | Negative | 4563918 - 4564478 | 20953.2 |
| dna alkylation repair protein | DUE52_18350 | Not Available | Positive | 4564557 - 4565255 | 27289.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
